Top 10 Diseases Caused by Contaminated Well Water (and How to Protect Your Home)
Private wells provide independence—but they’re not regulated like public systems. If contamination slips in, family health is on the line. This four‑part guide explains the **most common diseases and conditions linked to contaminated well water**, how contamination happens, and the **exact UV, RO, iron/sulfur, and metals solutions** that stop it. All links below go to live, working pages on Water Softener Plus.
Medical note: This article is educational and not medical advice. If you suspect illness from water, contact your clinician and local health department immediately. In a suspected contamination event, use safe water for drinking, ice, baby formula, and brushing teeth until corrected.
Risks, How Contamination Happens, & What You Should Test (and When)
How wells get contaminated
- Surface intrusion: Floods or heavy rain carry fecal germs (E. coli, norovirus), parasites (Giardia, Cryptosporidium), and chemicals into shallow or compromised wells.
- Well construction failures: Missing sanitary seal, cracked casing, or shallow depth allow runoff and vermin paths to the aquifer.
- Septic proximity / failures: Improper siting or leaks introduce bacteria and viruses.
- Geology & plumbing: Natural arsenic, manganese, or lead from old pipes/solder can dissolve into water. pH and redox conditions matter.
Bottom line: private wells are the owner’s responsibility. Routine testing + the right treatment stack keeps risk low.
What to test & how often
- At least annually: total coliform, E. coli, nitrates, TDS, pH (plus local risks). After floods or repairs, test again.
- If stains/odor: iron, manganese, hydrogen sulfide. If infants are present: nitrates/nitrites immediately.
- If taste/health concerns: consider metals panel (lead, arsenic), and PFAS screening where indicated by local advisories.
Immediate safety moves if you suspect contamination
- Use safe water for drinking, baby formula, ice, cooking, and brushing teeth. Boil clear water (1 minute rolling boil; 3 minutes at elevation) or use a certified safe source until the issue is fixed.
- Shock disinfect the well (if appropriate) and **install point‑of‑entry UV** for ongoing microbiological control. Pair UV with **sediment and carbon pre‑filtration** so UV light reaches germs effectively.
- For dissolved risks (nitrates, arsenic, lead, PFAS), add **under‑sink RO** at the kitchen for a final barrier.
Tip: if iron/sulfur are present (orange stains or rotten‑egg odor), stage an iron/sulfur filter before UV to protect the lamp and improve taste.
Top Diseases from Contaminated Well Water (#1–5) & The Fixes that Work
Symptoms listed are common patterns, not diagnoses. Always consult a healthcare professional.
#1 Norovirus Gastroenteritis
What it is: A highly contagious virus that triggers sudden vomiting and diarrhea; very low infectious dose, spreads rapidly in households.
How it gets in wells: Fecal contamination—flooding, septic failures, or surface water intrusion.
Prevention stack: Whole‑home UV disinfection to inactivate viruses, plus **sediment + carbon prefilters** and **under‑sink RO** at the kitchen for a final barrier to particles & many chemicals.
#2 Giardiasis (Giardia lamblia)
What it is: A protozoan parasite causing prolonged, greasy diarrhea, cramps, gas, and fatigue; cysts are hardy in the environment.
Well pathway: Animal or human waste reaching the aquifer; resistant to simple chlorine doses.
Prevention stack: **UV disinfection** (effective against Giardia), staged **sediment + carbon**, and **RO** at the faucet for drinking/cooking water.
#3 Cryptosporidiosis (Cryptosporidium)
What it is: A protozoan infection with watery diarrhea; oocysts can resist routine chlorination but are inactivated by **UV** and removed by tight membranes.
Prevention stack: **UV** point‑of‑entry + **under‑sink RO** for cooking/drinking; maintain prefilters to protect the UV lamp and membrane.
#4 Campylobacteriosis (Campylobacter)
What it is: Bacterial diarrhea often with fever and cramps; a leading bacterial cause of gastroenteritis.
Prevention stack: **UV** inactivation + good well construction & sanitary protection; consider under‑sink RO for the kitchen.
#5 STEC Infection (Shiga toxin‑producing E. coli, incl. O157:H7)
What it is: Ranges from mild diarrhea to severe illness (HUS risk). Often linked to fecal contamination.
Prevention stack: **UV** for disinfection at entry; keep **sediment/carbon** fresh; add **RO** at the kitchen for daily consumption.
Top Diseases & Conditions (#6–10) You Can Prevent with the Right Stack
#6 Hepatitis A
What it is: A viral liver infection spread via the fecal–oral route. Private wells can be a pathway during sewage failures or floods.
Prevention stack: **UV disinfection** at entry + **RO** at the tap. If your area has frequent sewage incidents, consider periodic shock chlorination and confirm with annual lab testing.
#7 Legionnaires’ Disease (Legionella)
What it is: A serious pneumonia acquired by inhaling aerosolized water containing Legionella (e.g., showers). While more often a building‑water issue, poorly protected private well systems can contribute if conditions allow growth (stagnation, warm temperatures, lack of residual disinfectant).
Prevention stack: Keep cold water truly cold, run fixtures regularly, maintain heaters, and use **UV disinfection** at entry. Consider periodic thermal or chemical control under professional guidance for complex buildings.
#8 Methemoglobinemia (“Blue Baby Syndrome” from Nitrates/Nitrites)
What it is: In infants, nitrite formed from nitrate can reduce blood’s oxygen‑carrying capacity, causing cyanosis and other symptoms.
Well pathway: Agricultural runoff, septic leachate, or geology elevating nitrates in groundwater.
Prevention stack: **Under‑sink RO** for infant formula/bottle water; consider whole‑home options if nitrates are very high. Boiling does not remove nitrates (it can concentrate them).
#9 Arsenicosis & Long‑Term Cancer Risk (Arsenic)
What it is: Chronic arsenic exposure can cause skin changes, cardiovascular issues, and increased cancer risk over years of consumption.
Well pathway: Natural geologic sources; more common in specific regions.
Prevention stack: **Under‑sink RO** at the kitchen. For higher arsenic or mixed speciation (As(III)/As(V)), contact a pro for oxidation + adsorption design. Re‑test after install.
#10 Lead Poisoning (Lead in Water)
What it is: Lead affects neurological development in children and cardiovascular & kidney health in adults. In well systems, the source is usually plumbing (leaded components), not the aquifer.
Prevention stack: Replace leaded components; maintain non‑corrosive water chemistry. Use **under‑sink RO** at the kitchen for a final barrier for drinking & cooking.
Related nuisance issues (not “diseases,” but often co‑occurring)
- Iron & manganese: Staining, metallic taste, black slime—solve upstream with a air‑injection iron/sulfur filter or a metals media system (great for Fe/Mn).
- Hydrogen sulfide (“rotten egg”): Fix upstream with oxidation + filtration, then UV for microbes. Learn more: Sulfur in Water.
The Playbook: Test → Fix → Verify → Maintain
1) Test
- Baseline: coliform/E. coli, nitrates, pH, TDS annually; add iron/manganese/H2S if stains/odor appear.
- After events: retest after floods, service, or new construction.
- For infants: test nitrates before use.
2) Fix (Treatment Stack)
- Microbes: UV disinfection at entry + proper sediment/carbon prefilters.
- Nitrates, arsenic, lead, PFAS: Under‑sink RO for drinking/cooking.
- Iron/sulfur/manganese: Air‑injection iron/sulfur and/or metals media.
3) Verify & Maintain
- Post‑install test: confirm microbes are non‑detect and nitrates/metals meet targets.
- UV care: change lamp annually; keep quartz sleeve clean; replace prefilters on schedule.
- RO care: change sediment/carbon 6–12 months; membrane 24–36 months; sanitize yearly.
Recommended, Ready‑to‑Buy Picks
Point‑of‑Entry UV (Most Homes)
Simple, chemical‑free disinfection for bacteria, viruses & protozoa.
VIQUA UV (3 gpm) See All UVHigh‑Flow UV + Prefilters
For larger homes with multiple baths or higher flow needs.
PURA 10 gpm TripleUnder‑Sink RO (Dissolved Risks)
Great for nitrates, arsenic, lead, PFAS at the kitchen tap.
Under‑Sink RO CollectionAdvanced: Iron & Sulfur Sizing and RO Planning
FAQs
Is UV enough by itself? UV inactivates microbes but does not remove chemicals. Pair with RO at the sink if nitrates, arsenic, lead, or PFAS are concerns.
Do I need a softener? A softener fixes “hardness feel” and scale on fixtures. It’s not a health device and does not remove microbes; use UV/RO as needed.
What about sulfur smell? Treat the odor upstream (oxidation/filtration) then UV for microbes. See Sulfur in Water.

